Molecular Computational Models: Unconventional Approaches

Molecular Computational Models: Unconventional Approaches

Indexed In: SCOPUS
Release Date: January, 2005|Copyright: © 2005 |Pages: 287
DOI: 10.4018/978-1-59140-333-3
ISBN13: 9781591403333|ISBN10: 1591403332|EISBN13: 9781591403357
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Description & Coverage
Description:

With the increasing complexity of software systems and their widespread growth into many aspects of our lives, the need to search for new models, paradigms, and ultimately, technologies, to manage this problem is evident. The way nature solves various problems through processes evolving during billions of years was always an inspiration to many computational paradigms; on the other hand, the complexity of the problems posed by the investigation of biological systems challenged the research of new tractable models. Molecular Computational Models: Unconventional Approaches is looking into new computational paradigms from both a theoretical perspective which offers a solid foundation of the models developed, as well as from a modeling angle, in order to reveal their effectiveness in modeling and simulating, especially biological systems. Tools and programming concepts and implementation issues are also discussed in the context of some experiments and comparative studies.

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Reviews & Statements

Natural Computing is a research area concerned with computing taking place in nature as well as with human-designed computing inspired by nature. It is a very active and exciting research area which has already contributed to a broader and deeper understanding of the notion of computation. Research in Natural Computing has led to a big variety of models of computation inspired by nature as well as to computational models of specific phenomena taking place in nature. Molecular Computational Models, edited by M. Gheorghe, presents a number of such models which are based on (deal with) biological processes.The choice of the presented models and research areas is very broad and interesting. Some chapters deal with formal computational properties of the models, some deal with their modeling potential, and some with the biological insights provided by the models. Then the book offers also different points of view (the underlying research cultures): some models are based on the classical mathematical concepts, some are rooted in the culture of computer science, and some follow the way of modeling that is traditional in biology. The covered topics (keywords) include: membrane computing, dynamical systems, transition systems, DNA-based computation, error propagation and management, networks of evolutionary processes, complexity aspects of membrane systems, programming languages inspired by developmental processes, models of bacterial evolution, T cell signaling network, and multi-agent systems. The chapters are presented in a tutorial/survey fashion which makes them well accessible also to newcomers to this broad research area. Altogether this is a valuable contribution to the literature on natural computing which will be really appreciated by students and researchers interested in the interaction between formal models and biology.

– G. Rozenberg, Leiden University, The Netherlands
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Editor/Author Biographies
Marian Gheorghe graduated from Bucharest University, Department of Mathematics and Computer Science and obtained a PhD degree with the same university in 1991. Between 1991 and 1998 he was with the University of Bucharest as a lecturer and then between 1998 and 200 with University of Pitesti as a senior lecturer. In 2000 he got a lectureship with Sheffield University. Dr Gheorghe is currently teaching software engineering and functional programming. One of the software engineering modules has a very innovative content involving running projects with real clients in a student-based company. He is interested in computational models and their applications in software engineering, especially formal specifications, and in biology. He published more than 50 papers and presented some of them to different international conferences and workshops. Dr Gheorghe co-edited special issues for two journals.
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